BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C06SP1|AL426181
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1710 981 0.0
3x_Contig941 333 3e-91
>3x_Contig1710
Length = 16151
Score = 981 bits (495), Expect = 0.0
Identities = 562/583 (96%), Gaps = 1/583 (0%)
Strand = Plus / Plus
Query: 1 tttaatatttctgttttcatcacgagataaatcagtagagacatctgtgctagcaatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15445 tttaatatttctgttttcatcacgagataaatcagtagagacatctgtgctagcaatgtt 15504
Query: 61 gaatccagtgttagcgatggtaccatacagttgaccgttcgacatgtcggaggaaccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15505 gaatccagtgttagcgatggtaccatacagttgaccgttcgacatgtcggaggaaccatt 15564
Query: 121 actgtgtgacattccgtgtccattagaagcaccgttggaaccatacatctgtcccgtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15565 actgtgtgacattccgtgtccattagaagcaccgttggaaccatacatctgtcccgtaga 15624
Query: 181 ttctgacagcagttgtgacctcatggcagaatcaggagcatcgtacattttgaaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15625 ttctgacagcagttgtgacctcatggcagaatcaggagcatcgtacattttgaaagctct 15684
Query: 241 cactgaaggctgaccgttgccatggctatgcaaatgagattggcttgattgaggcaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15685 cactgaaggctgaccgttgccatggctatgcaaatgagattggcttgattgaggcaacat 15744
Query: 301 ttgagtctgagagctgacacctaattgaccattacgggagggtgaagataattccaacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15745 ttgagtctgagagctgacacctaattgaccattacgggagggtgaagataattccaacga 15804
Query: 361 atgaattaaatctggattagattggaaaaggtttcgtaacaatggatttgtagtaacgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15805 atgaattaaatctggattagattggaaaaggtttcgtaacaatggatttgtagtaacgtt 15864
Query: 421 ataataagccatgaaaagctttggagtcaaatgggctaccgcattcggatcaatgtaaag 480
|||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||
Sbjct: 15865 ataataagccatgaaaagctttggagtcaaattggcta-cgctttcggatcaatgtaaag 15923
Query: 481 tccttgatctggtagaataaacatcatttgcgtaccaccgatatccaaaatggatcctga 540
|||||| ||||||||||||||| ||||||| ||||| ||||| ||||| | ||||
Sbjct: 15924 tccttgtcatggtagaataaacattttttgcgttacaccgttatccttaatggcttctga 15983
Query: 541 ggataacggatgaggcactgaattagggcctgaattaattcta 583
||||||||||||| ||||| ||| |||||||| |||| ||||
Sbjct: 15984 ggataacggatgacgcactttatttgggcctgacttaactcta 16026
>3x_Contig941
Length = 3149
Score = 333 bits (168), Expect = 3e-91
Identities = 188/192 (97%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 580 tctatggaaattgaccttggctccattacgtcccgtgacatgtaattcccatagtgcaga 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tctatggaaattgaccttggctccattacgtcccgtgacatgtaattcccatagtgcaga 66
Query: 640 atttgaattgaatttaatggtagc-atgctgccttg-acacaacttttgccggacctaaa 697
|||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 67 atttgaattgaatttaatggtagctattctgccttttacacaacttttgccggacctaaa 126
Query: 698 tctatatccaccgaagcatcgcctggagaagtgttcctcccaatgttaatcactatatct 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tctatatccaccgaagcatcgcctggagaagtgttcctcccaatgttaatcactatatct 186
Query: 758 ttcaaatagtaa 769
||||||||||||
Sbjct: 187 ttcaaatagtaa 198
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4789
Number of Sequences: 1807
Number of extensions: 4789
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)